Genome Details
Selected Rep_genome_ID: HRGMv2_1901
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A54.bin_31 | 3,751,544 | 99.06% | 0.94% | China(Inner Mongolia) | Asia | IMGG |
| AG528_74 | 3,164,049 | 94.81% | 0.94% | NA | Africa | H3AfricaPhase2 |
| CGMR099678 | 3,379,543 | 100% | 0% | China | Asia | CGMR |
| HRGMv2_1901 | 3,415,132 | 100% | 0% | South Korea | Asia | HRGM |
| Rep_1234 | 3,660,180 | 99.5283% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1901_CGC43 | CGCFAM_02889 | Yes | 6 | 1 | |
| HRGMv2_1901_CGC1 | CGCFAM_03666 | Yes | 6 | 2 | |
| HRGMv2_1901_CGC19 | CGCFAM_03943 | Yes | 3 | 1 | |
| HRGMv2_1901_CGC9 | CGCFAM_04727 | Yes | 8 | 1 | |
| HRGMv2_1901_CGC22 | CGCFAM_06074 | Yes | 12 | 1 | |
| HRGMv2_1901_CGC53 | CGCFAM_06606 | Yes | 7 | 2 | |
| HRGMv2_1901_CGC21 | CGCFAM_08015 | Yes | 7 | 3 | |
| HRGMv2_1901_CGC28 | CGCFAM_08153 | Yes | 3 | 2 | |
| HRGMv2_1901_CGC17 | CGCFAM_09889 | Yes | 9 | 4 | |
| HRGMv2_1901_CGC2 | CGCFAM_09890 | Yes | 7 | 1 | |
| HRGMv2_1901_CGC38 | CGCFAM_09891 | Yes | 10 | 1 | |
| HRGMv2_1901_CGC39 | CGCFAM_09892 | Yes | 7 | 1 | |
| HRGMv2_1901_CGC50 | CGCFAM_09893 | Yes | 3 | 1 |
Top CAZyme Families