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Cluster: HRGMv2_1901_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1901_7 HRGMv2_1901_7_73 70127 71566 + 4.A.1.2.11
CAZyme HRGMv2_1901_7 HRGMv2_1901_7_74 71597 73021 + GH1
pfam HRGMv2_1901_7 HRGMv2_1901_7_75 73128 73931 + YdjC
TC HRGMv2_1901_7 HRGMv2_1901_7_76 73928 74407 + 4.A.1.2.6
CAZyme HRGMv2_1901_7 HRGMv2_1901_7_77 74453 75640 + GH170
CAZyme HRGMv2_1901_7 HRGMv2_1901_7_78 75659 76807 + CE9
pfam HRGMv2_1901_7 HRGMv2_1901_7_79 76815 77657 + DUF34_NIF3
pfam HRGMv2_1901_7 HRGMv2_1901_7_80 78032 78331 + Fic-like_C
CAZyme HRGMv2_1901_7 HRGMv2_1901_7_81 79339 80469 + CE9
Gene ID: HRGMv2_1901_7_73
Type: TC
Location: 70127 - 71566 (+)
Gene ID: HRGMv2_1901_7_74
Type: CAZyme
Location: 71597 - 73021 (+)
Gene ID: HRGMv2_1901_7_75
Type: pfam
Location: 73128 - 73931 (+)
Gene ID: HRGMv2_1901_7_76
Type: TC
Location: 73928 - 74407 (+)
Gene ID: HRGMv2_1901_7_77
Type: CAZyme
Location: 74453 - 75640 (+)
Gene ID: HRGMv2_1901_7_78
Type: CAZyme
Location: 75659 - 76807 (+)
Gene ID: HRGMv2_1901_7_79
Type: pfam
Location: 76815 - 77657 (+)
Gene ID: HRGMv2_1901_7_80
Type: pfam
Location: 78032 - 78331 (+)
Gene ID: HRGMv2_1901_7_81
Type: CAZyme
Location: 79339 - 80469 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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