Cluster: HRGMv2_1901_CGC50
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_09893
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_27 | HRGMv2_1901_27_31 | 26297 | 28453 | - | 3.A.1.112.9 |
| pfam | HRGMv2_1901_27 | HRGMv2_1901_27_32 | 28455 | 29183 | - | Flavodoxin_2 | FMN_red |
| CAZyme | HRGMv2_1901_27 | HRGMv2_1901_27_33 | 29170 | 30426 | - | GT1 |
Gene ID: HRGMv2_1901_27_31
Type: TC
Location: 26297 - 28453 (-)
Type: TC
Location: 26297 - 28453 (-)
Gene ID: HRGMv2_1901_27_32
Type: pfam
Location: 28455 - 29183 (-)
Type: pfam
Location: 28455 - 29183 (-)
Gene ID: HRGMv2_1901_27_33
Type: CAZyme
Location: 29170 - 30426 (-)
Type: CAZyme
Location: 29170 - 30426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.