Cluster: HRGMv2_1901_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_03943
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_8 | HRGMv2_1901_8_44 | 44603 | 45952 | - | 2.A.66.1.33 |
| pfam | HRGMv2_1901_8 | HRGMv2_1901_8_45 | 46414 | 47265 | + | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_1901_8 | HRGMv2_1901_8_46 | 47324 | 48940 | - | GH25 |
Gene ID: HRGMv2_1901_8_44
Type: TC
Location: 44603 - 45952 (-)
Type: TC
Location: 44603 - 45952 (-)
Gene ID: HRGMv2_1901_8_45
Type: pfam
Location: 46414 - 47265 (+)
Type: pfam
Location: 46414 - 47265 (+)
Gene ID: HRGMv2_1901_8_46
Type: CAZyme
Location: 47324 - 48940 (-)
Type: CAZyme
Location: 47324 - 48940 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.