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Cluster: HRGMv2_1901_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1901_5 HRGMv2_1901_5_93 94866 96302 - GH1
pfam HRGMv2_1901_5 HRGMv2_1901_5_94 96304 97338 - UxuA
STP HRGMv2_1901_5 HRGMv2_1901_5_95 97354 98115 - HTH_IclR | IclR
TC HRGMv2_1901_5 HRGMv2_1901_5_96 98202 99533 - 4.A.3.2.9
pfam HRGMv2_1901_5 HRGMv2_1901_5_97 100240 101037 - YdjC
TC HRGMv2_1901_5 HRGMv2_1901_5_98 101012 102442 - 4.A.1.2.3
pfam HRGMv2_1901_5 HRGMv2_1901_5_99 102504 103358 - PRD | PRD | CAT_RBD
TC HRGMv2_1901_5 HRGMv2_1901_5_100 103330 103824 - 4.A.1.1.13
Gene ID: HRGMv2_1901_5_93
Type: CAZyme
Location: 94866 - 96302 (-)
Gene ID: HRGMv2_1901_5_94
Type: pfam
Location: 96304 - 97338 (-)
Gene ID: HRGMv2_1901_5_95
Type: STP
Location: 97354 - 98115 (-)
Gene ID: HRGMv2_1901_5_96
Type: TC
Location: 98202 - 99533 (-)
Gene ID: HRGMv2_1901_5_97
Type: pfam
Location: 100240 - 101037 (-)
Gene ID: HRGMv2_1901_5_98
Type: TC
Location: 101012 - 102442 (-)
Gene ID: HRGMv2_1901_5_99
Type: pfam
Location: 102504 - 103358 (-)
Gene ID: HRGMv2_1901_5_100
Type: TC
Location: 103330 - 103824 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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