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Genome Details

Selected Rep_genome_ID: HRGMv2_1815
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Gammaproteobacteria
→
Order
Enterobacterales
→
Family
Enterobacteriaceae
→
Genus
Pantoea
→
Species
Pantoea brenneri
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_1815 4,701,317 100% 0% UK Europe HRGM
MGYG000003386 4,846,469 100% 0.12% United States North America UHGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_1815_CGC49 CGCFAM_00036 Yes 6 3
HRGMv2_1815_CGC48 CGCFAM_00038 Yes 3 1
HRGMv2_1815_CGC28 CGCFAM_00041 Yes 3 1
HRGMv2_1815_CGC36 CGCFAM_00042 Yes 4 1 beta-glucan
HRGMv2_1815_CGC7 CGCFAM_00123 Yes 8 4
HRGMv2_1815_CGC25 CGCFAM_00261 Yes 5 1
HRGMv2_1815_CGC39 CGCFAM_00293 Yes 6 1
HRGMv2_1815_CGC47 CGCFAM_00373 Yes 6 1
HRGMv2_1815_CGC14 CGCFAM_00399 Yes 7 1
HRGMv2_1815_CGC56 CGCFAM_00447 Yes 3 1
HRGMv2_1815_CGC55 CGCFAM_00487 Yes 9 1
HRGMv2_1815_CGC31 CGCFAM_00625 Yes 17 1
HRGMv2_1815_CGC41 CGCFAM_00813 Yes 4 1
HRGMv2_1815_CGC42 CGCFAM_00914 Yes 3 1
HRGMv2_1815_CGC19 CGCFAM_01210 Yes 3 1
HRGMv2_1815_CGC11 CGCFAM_02170 Yes 6 1
HRGMv2_1815_CGC18 CGCFAM_02218 Yes 11 1
HRGMv2_1815_CGC24 CGCFAM_02219 Yes 12 1
HRGMv2_1815_CGC8 CGCFAM_02536 Yes 12 2
HRGMv2_1815_CGC53 CGCFAM_02885 Yes 18 2
HRGMv2_1815_CGC2 CGCFAM_03067 Yes 6 1
HRGMv2_1815_CGC51 CGCFAM_03285 Yes 7 4
HRGMv2_1815_CGC13 CGCFAM_03874 Yes 5 1
HRGMv2_1815_CGC26 CGCFAM_04025 Yes 7 1
HRGMv2_1815_CGC52 CGCFAM_04026 Yes 7 1
Top CAZyme Families