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Cluster: HRGMv2_1815_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1815_25 HRGMv2_1815_25_9 8331 9413 - GH103
TC HRGMv2_1815_25 HRGMv2_1815_25_10 9562 10239 - 5.A.3.1.1
pfam HRGMv2_1815_25 HRGMv2_1815_25_11 10236 10964 - Nitrate_red_del
TC HRGMv2_1815_25 HRGMv2_1815_25_12 10961 12505 - 5.A.3.1.1
TC HRGMv2_1815_25 HRGMv2_1815_25_13 12502 14076 - 5.A.3.1.1
TC HRGMv2_1815_25 HRGMv2_1815_25_14 14201 16249 - 5.A.3.1.1
TC HRGMv2_1815_25 HRGMv2_1815_25_15 16351 17742 - 2.A.1.8.1
Gene ID: HRGMv2_1815_25_9
Type: CAZyme
Location: 8331 - 9413 (-)
Gene ID: HRGMv2_1815_25_10
Type: TC
Location: 9562 - 10239 (-)
Gene ID: HRGMv2_1815_25_11
Type: pfam
Location: 10236 - 10964 (-)
Gene ID: HRGMv2_1815_25_12
Type: TC
Location: 10961 - 12505 (-)
Gene ID: HRGMv2_1815_25_13
Type: TC
Location: 12502 - 14076 (-)
Gene ID: HRGMv2_1815_25_14
Type: TC
Location: 14201 - 16249 (-)
Gene ID: HRGMv2_1815_25_15
Type: TC
Location: 16351 - 17742 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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