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Cluster: HRGMv2_1815_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_8 HRGMv2_1815_8_16 16642 17049 + 3.A.6.2.1
TC HRGMv2_1815_8 HRGMv2_1815_8_17 17052 17450 + 3.A.6.2.1
TC HRGMv2_1815_8 HRGMv2_1815_8_18 17447 18181 + 3.A.6.2.1
TC HRGMv2_1815_8 HRGMv2_1815_8_19 18205 18474 + 3.A.6.2.1
TC HRGMv2_1815_8 HRGMv2_1815_8_20 18474 19259 + 3.A.6.2.1
TF HRGMv2_1815_8 HRGMv2_1815_8_21 19888 20523 + GerE
TC HRGMv2_1815_8 HRGMv2_1815_8_22 20664 22370 + 1.B.52.2.1
pfam HRGMv2_1815_8 HRGMv2_1815_8_23 22511 22705 - DSRB
TC HRGMv2_1815_8 HRGMv2_1815_8_24 22769 22927 - 9.B.12.2.1
pfam HRGMv2_1815_8 HRGMv2_1815_8_25 23242 23475 + DUF2525
pfam HRGMv2_1815_8 HRGMv2_1815_8_26 23825 24613 + S6PP | Hydrolase_3
CAZyme HRGMv2_1815_8 HRGMv2_1815_8_27 24644 25864 + GT81
Gene ID: HRGMv2_1815_8_16
Type: TC
Location: 16642 - 17049 (+)
Gene ID: HRGMv2_1815_8_17
Type: TC
Location: 17052 - 17450 (+)
Gene ID: HRGMv2_1815_8_18
Type: TC
Location: 17447 - 18181 (+)
Gene ID: HRGMv2_1815_8_19
Type: TC
Location: 18205 - 18474 (+)
Gene ID: HRGMv2_1815_8_20
Type: TC
Location: 18474 - 19259 (+)
Gene ID: HRGMv2_1815_8_21
Type: TF
Location: 19888 - 20523 (+)
Gene ID: HRGMv2_1815_8_22
Type: TC
Location: 20664 - 22370 (+)
Gene ID: HRGMv2_1815_8_23
Type: pfam
Location: 22511 - 22705 (-)
Gene ID: HRGMv2_1815_8_24
Type: TC
Location: 22769 - 22927 (-)
Gene ID: HRGMv2_1815_8_25
Type: pfam
Location: 23242 - 23475 (+)
Gene ID: HRGMv2_1815_8_26
Type: pfam
Location: 23825 - 24613 (+)
Gene ID: HRGMv2_1815_8_27
Type: CAZyme
Location: 24644 - 25864 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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