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Cluster: HRGMv2_1815_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_28 HRGMv2_1815_28_2 1826 3223 + 1.B.25.1.13
CAZyme HRGMv2_1815_28 HRGMv2_1815_28_3 3275 5926 + GH20
TC HRGMv2_1815_28 HRGMv2_1815_28_4 6048 8492 - 1.A.23.1.2
peptidase HRGMv2_1815_28 HRGMv2_1815_28_5 8744 9691 - S11.002
TC HRGMv2_1815_28 HRGMv2_1815_28_6 9869 10456 - 9.B.29.3.1
TC HRGMv2_1815_28 HRGMv2_1815_28_7 10663 11241 + 9.B.27.2.7
sulfatase HRGMv2_1815_28 HRGMv2_1815_28_8 11235 12008 - S1_4
CAZyme HRGMv2_1815_28 HRGMv2_1815_28_9 12195 14009 + GH15
peptidase HRGMv2_1815_28 HRGMv2_1815_28_10 14206 15297 + C82.UPA
TC HRGMv2_1815_28 HRGMv2_1815_28_11 15529 17130 + 2.A.20.1.2
TC HRGMv2_1815_28 HRGMv2_1815_28_12 17152 18339 - 2.A.1.46.7
pfam HRGMv2_1815_28 HRGMv2_1815_28_13 18412 19362 - Dus
TC HRGMv2_1815_28 HRGMv2_1815_28_14 19365 20729 - 1.I.1.1.3
TC HRGMv2_1815_28 HRGMv2_1815_28_15 20980 21372 - 9.B.15.1.2
pfam HRGMv2_1815_28 HRGMv2_1815_28_16 21552 22313 + Exo_endo_phos
pfam HRGMv2_1815_28 HRGMv2_1815_28_17 22310 23554 + PLDc | PLDc_2 | PLDc_2
TC HRGMv2_1815_28 HRGMv2_1815_28_18 23554 24522 + 4.D.2.4.3
TC HRGMv2_1815_28 HRGMv2_1815_28_19 24578 25285 - 1.A.14.2.2
Gene ID: HRGMv2_1815_28_2
Type: TC
Location: 1826 - 3223 (+)
Gene ID: HRGMv2_1815_28_3
Type: CAZyme
Location: 3275 - 5926 (+)
Gene ID: HRGMv2_1815_28_4
Type: TC
Location: 6048 - 8492 (-)
Gene ID: HRGMv2_1815_28_5
Type: peptidase
Location: 8744 - 9691 (-)
Gene ID: HRGMv2_1815_28_6
Type: TC
Location: 9869 - 10456 (-)
Gene ID: HRGMv2_1815_28_7
Type: TC
Location: 10663 - 11241 (+)
Gene ID: HRGMv2_1815_28_8
Type: sulfatase
Location: 11235 - 12008 (-)
Gene ID: HRGMv2_1815_28_9
Type: CAZyme
Location: 12195 - 14009 (+)
Gene ID: HRGMv2_1815_28_10
Type: peptidase
Location: 14206 - 15297 (+)
Gene ID: HRGMv2_1815_28_11
Type: TC
Location: 15529 - 17130 (+)
Gene ID: HRGMv2_1815_28_12
Type: TC
Location: 17152 - 18339 (-)
Gene ID: HRGMv2_1815_28_13
Type: pfam
Location: 18412 - 19362 (-)
Gene ID: HRGMv2_1815_28_14
Type: TC
Location: 19365 - 20729 (-)
Gene ID: HRGMv2_1815_28_15
Type: TC
Location: 20980 - 21372 (-)
Gene ID: HRGMv2_1815_28_16
Type: pfam
Location: 21552 - 22313 (+)
Gene ID: HRGMv2_1815_28_17
Type: pfam
Location: 22310 - 23554 (+)
Gene ID: HRGMv2_1815_28_18
Type: TC
Location: 23554 - 24522 (+)
Gene ID: HRGMv2_1815_28_19
Type: TC
Location: 24578 - 25285 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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