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Cluster: HRGMv2_1815_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1815_5 HRGMv2_1815_5_172 197011 198930 - GH23
TC HRGMv2_1815_5 HRGMv2_1815_5_173 199201 200997 + 3.A.9.1.1
sulfatase HRGMv2_1815_5 HRGMv2_1815_5_174 201001 204618 + S1_37
TF HRGMv2_1815_5 HRGMv2_1815_5_175 204628 205329 + GntR
TC HRGMv2_1815_5 HRGMv2_1815_5_176 205359 206627 + 3.A.1.4.5
TC HRGMv2_1815_5 HRGMv2_1815_5_177 206737 208302 + 3.A.1.4.4
TC HRGMv2_1815_5 HRGMv2_1815_5_178 208302 209378 + 3.A.1.4.4
TC HRGMv2_1815_5 HRGMv2_1815_5_179 209371 210162 + 3.A.1.4.4
TC HRGMv2_1815_5 HRGMv2_1815_5_180 210116 210862 + 3.A.1.4.4
pfam HRGMv2_1815_5 HRGMv2_1815_5_181 210877 211890 - DUF4432
TC HRGMv2_1815_5 HRGMv2_1815_5_182 211887 213212 - 2.A.1.7.5
Gene ID: HRGMv2_1815_5_172
Type: CAZyme
Location: 197011 - 198930 (-)
Gene ID: HRGMv2_1815_5_173
Type: TC
Location: 199201 - 200997 (+)
Gene ID: HRGMv2_1815_5_174
Type: sulfatase
Location: 201001 - 204618 (+)
Gene ID: HRGMv2_1815_5_175
Type: TF
Location: 204628 - 205329 (+)
Gene ID: HRGMv2_1815_5_176
Type: TC
Location: 205359 - 206627 (+)
Gene ID: HRGMv2_1815_5_177
Type: TC
Location: 206737 - 208302 (+)
Gene ID: HRGMv2_1815_5_178
Type: TC
Location: 208302 - 209378 (+)
Gene ID: HRGMv2_1815_5_179
Type: TC
Location: 209371 - 210162 (+)
Gene ID: HRGMv2_1815_5_180
Type: TC
Location: 210116 - 210862 (+)
Gene ID: HRGMv2_1815_5_181
Type: pfam
Location: 210877 - 211890 (-)
Gene ID: HRGMv2_1815_5_182
Type: TC
Location: 211887 - 213212 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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