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Cluster: HRGMv2_1815_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_31 HRGMv2_1815_31_1 1100 2710 + 3.A.1.5.39
TC HRGMv2_1815_31 HRGMv2_1815_31_2 2882 3901 + 3.A.1.5.39
TC HRGMv2_1815_31 HRGMv2_1815_31_3 3911 4813 + 3.A.1.5.27
TC HRGMv2_1815_31 HRGMv2_1815_31_4 4826 5812 + 3.A.1.5.27
TC HRGMv2_1815_31 HRGMv2_1815_31_5 5802 6824 + 3.A.1.5.27
pfam HRGMv2_1815_31 HRGMv2_1815_31_6 7329 7919 + CBP_BcsO
STP HRGMv2_1815_31 HRGMv2_1815_31_7 7910 8713 + CbiA
CAZyme HRGMv2_1815_31 HRGMv2_1815_31_8 8767 10878 + GT2
TC HRGMv2_1815_31 HRGMv2_1815_31_9 10875 13481 + 4.D.3.1.6
Gene ID: HRGMv2_1815_31_1
Type: TC
Location: 1100 - 2710 (+)
Gene ID: HRGMv2_1815_31_2
Type: TC
Location: 2882 - 3901 (+)
Gene ID: HRGMv2_1815_31_3
Type: TC
Location: 3911 - 4813 (+)
Gene ID: HRGMv2_1815_31_4
Type: TC
Location: 4826 - 5812 (+)
Gene ID: HRGMv2_1815_31_5
Type: TC
Location: 5802 - 6824 (+)
Gene ID: HRGMv2_1815_31_6
Type: pfam
Location: 7329 - 7919 (+)
Gene ID: HRGMv2_1815_31_7
Type: STP
Location: 7910 - 8713 (+)
Gene ID: HRGMv2_1815_31_8
Type: CAZyme
Location: 8767 - 10878 (+)
Gene ID: HRGMv2_1815_31_9
Type: TC
Location: 10875 - 13481 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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