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Cluster: HRGMv2_1815_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_3 HRGMv2_1815_3_122 138341 139681 + 2.A.8.1.8
TC HRGMv2_1815_3 HRGMv2_1815_3_123 139739 140332 - 2.A.95.1.5
pfam HRGMv2_1815_3 HRGMv2_1815_3_124 140552 141661 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme HRGMv2_1815_3 HRGMv2_1815_3_125 142027 144210 + CBM48 | GH13_9
CAZyme HRGMv2_1815_3 HRGMv2_1815_3_126 144207 146189 + CBM48 | GH13_11
pfam HRGMv2_1815_3 HRGMv2_1815_3_127 146200 147492 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_1815_3 HRGMv2_1815_3_128 147555 148988 + GT5
CAZyme HRGMv2_1815_3 HRGMv2_1815_3_129 149008 151455 + GT35
Gene ID: HRGMv2_1815_3_122
Type: TC
Location: 138341 - 139681 (+)
Gene ID: HRGMv2_1815_3_123
Type: TC
Location: 139739 - 140332 (-)
Gene ID: HRGMv2_1815_3_124
Type: pfam
Location: 140552 - 141661 (+)
Gene ID: HRGMv2_1815_3_125
Type: CAZyme
Location: 142027 - 144210 (+)
Gene ID: HRGMv2_1815_3_126
Type: CAZyme
Location: 144207 - 146189 (+)
Gene ID: HRGMv2_1815_3_127
Type: pfam
Location: 146200 - 147492 (+)
Gene ID: HRGMv2_1815_3_128
Type: CAZyme
Location: 147555 - 148988 (+)
Gene ID: HRGMv2_1815_3_129
Type: CAZyme
Location: 149008 - 151455 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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