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Cluster: HRGMv2_1815_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_9 HRGMv2_1815_9_30 32342 32647 - 3.A.1.27.3
TC HRGMv2_1815_9 HRGMv2_1815_9_31 32647 33285 - 3.A.1.27.3
TC HRGMv2_1815_9 HRGMv2_1815_9_32 33302 33847 - 3.A.1.27.3
TC HRGMv2_1815_9 HRGMv2_1815_9_33 33852 34634 - 3.A.1.27.3
TC HRGMv2_1815_9 HRGMv2_1815_9_34 34639 35454 - 3.A.1.27.3
TC HRGMv2_1815_9 HRGMv2_1815_9_35 35682 36662 + 2.A.19.5.1
STP HRGMv2_1815_9 HRGMv2_1815_9_36 36679 37662 + CBS | CBS | SIS
pfam HRGMv2_1815_9 HRGMv2_1815_9_37 37676 38242 + Hydrolase_3
TC HRGMv2_1815_9 HRGMv2_1815_9_38 38239 38808 + 1.B.42.1.2
TC HRGMv2_1815_9 HRGMv2_1815_9_39 38783 39334 + 1.B.42.1.2
TC HRGMv2_1815_9 HRGMv2_1815_9_40 39340 40065 + 1.B.42.1.2
pfam HRGMv2_1815_9 HRGMv2_1815_9_41 40114 41547 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
pfam HRGMv2_1815_9 HRGMv2_1815_9_42 41569 41856 + Ribosomal_S30AE
TC HRGMv2_1815_9 HRGMv2_1815_9_43 42009 42488 + 4.A.2.1.7
pfam HRGMv2_1815_9 HRGMv2_1815_9_44 42536 43390 + RapZ-like_N | PapZ_C
STP HRGMv2_1815_9 HRGMv2_1815_9_45 43387 43659 + PTS-HPr
CAZyme HRGMv2_1815_9 HRGMv2_1815_9_46 43663 44382 - GT51
Gene ID: HRGMv2_1815_9_30
Type: TC
Location: 32342 - 32647 (-)
Gene ID: HRGMv2_1815_9_31
Type: TC
Location: 32647 - 33285 (-)
Gene ID: HRGMv2_1815_9_32
Type: TC
Location: 33302 - 33847 (-)
Gene ID: HRGMv2_1815_9_33
Type: TC
Location: 33852 - 34634 (-)
Gene ID: HRGMv2_1815_9_34
Type: TC
Location: 34639 - 35454 (-)
Gene ID: HRGMv2_1815_9_35
Type: TC
Location: 35682 - 36662 (+)
Gene ID: HRGMv2_1815_9_36
Type: STP
Location: 36679 - 37662 (+)
Gene ID: HRGMv2_1815_9_37
Type: pfam
Location: 37676 - 38242 (+)
Gene ID: HRGMv2_1815_9_38
Type: TC
Location: 38239 - 38808 (+)
Gene ID: HRGMv2_1815_9_39
Type: TC
Location: 38783 - 39334 (+)
Gene ID: HRGMv2_1815_9_40
Type: TC
Location: 39340 - 40065 (+)
Gene ID: HRGMv2_1815_9_41
Type: pfam
Location: 40114 - 41547 (+)
Gene ID: HRGMv2_1815_9_42
Type: pfam
Location: 41569 - 41856 (+)
Gene ID: HRGMv2_1815_9_43
Type: TC
Location: 42009 - 42488 (+)
Gene ID: HRGMv2_1815_9_44
Type: pfam
Location: 42536 - 43390 (+)
Gene ID: HRGMv2_1815_9_45
Type: STP
Location: 43387 - 43659 (+)
Gene ID: HRGMv2_1815_9_46
Type: CAZyme
Location: 43663 - 44382 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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