dbCAN Logo

Cluster: HRGMv2_1815_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_3 HRGMv2_1815_3_133 154204 155163 - 2.A.69.3.3
TC HRGMv2_1815_3 HRGMv2_1815_3_134 155296 156096 - 3.B.1.1.4
TC HRGMv2_1815_3 HRGMv2_1815_3_135 156096 156929 - 3.B.1.1.4
pfam HRGMv2_1815_3 HRGMv2_1815_3_136 156922 157221 - ACP
pfam HRGMv2_1815_3 HRGMv2_1815_3_137 157230 158093 - CitG
TC HRGMv2_1815_3 HRGMv2_1815_3_138 158093 159748 - 3.B.1.1.4
pfam HRGMv2_1815_3 HRGMv2_1815_3_139 160180 161685 - DAO | DAO_C
STP HRGMv2_1815_3 HRGMv2_1815_3_140 161913 162239 + Rhodanese
TC HRGMv2_1815_3 HRGMv2_1815_3_141 162269 163090 + 9.B.104.1.1
TF HRGMv2_1815_3 HRGMv2_1815_3_142 163132 163890 + HTH_DeoR
CAZyme HRGMv2_1815_3 HRGMv2_1815_3_143 164048 166453 + GT35
CAZyme HRGMv2_1815_3 HRGMv2_1815_3_144 166462 168531 + GH77
Gene ID: HRGMv2_1815_3_133
Type: TC
Location: 154204 - 155163 (-)
Gene ID: HRGMv2_1815_3_134
Type: TC
Location: 155296 - 156096 (-)
Gene ID: HRGMv2_1815_3_135
Type: TC
Location: 156096 - 156929 (-)
Gene ID: HRGMv2_1815_3_136
Type: pfam
Location: 156922 - 157221 (-)
Gene ID: HRGMv2_1815_3_137
Type: pfam
Location: 157230 - 158093 (-)
Gene ID: HRGMv2_1815_3_138
Type: TC
Location: 158093 - 159748 (-)
Gene ID: HRGMv2_1815_3_139
Type: pfam
Location: 160180 - 161685 (-)
Gene ID: HRGMv2_1815_3_140
Type: STP
Location: 161913 - 162239 (+)
Gene ID: HRGMv2_1815_3_141
Type: TC
Location: 162269 - 163090 (+)
Gene ID: HRGMv2_1815_3_142
Type: TF
Location: 163132 - 163890 (+)
Gene ID: HRGMv2_1815_3_143
Type: CAZyme
Location: 164048 - 166453 (+)
Gene ID: HRGMv2_1815_3_144
Type: CAZyme
Location: 166462 - 168531 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List