Genome Details
Selected Rep_genome_ID: HRGMv2_1815
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea brenneri
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1815 | 4,701,317 | 100% | 0% | UK | Europe | HRGM |
| MGYG000003386 | 4,846,469 | 100% | 0.12% | United States | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1815_CGC32 | CGCFAM_05270 | Yes | 6 | 1 | |
| HRGMv2_1815_CGC23 | CGCFAM_05769 | Yes | 6 | 3 | |
| HRGMv2_1815_CGC21 | CGCFAM_06066 | Yes | 6 | 1 | |
| HRGMv2_1815_CGC33 | CGCFAM_06067 | Yes | 7 | 1 | |
| HRGMv2_1815_CGC46 | CGCFAM_06068 | Yes | 15 | 1 | |
| HRGMv2_1815_CGC54 | CGCFAM_06069 | Yes | 10 | 1 | |
| HRGMv2_1815_CGC45 | CGCFAM_06381 | Yes | 3 | 2 | |
| HRGMv2_1815_CGC1 | CGCFAM_09871 | Yes | 4 | 1 | |
| HRGMv2_1815_CGC10 | CGCFAM_09872 | Yes | 5 | 1 | |
| HRGMv2_1815_CGC12 | CGCFAM_09873 | Yes | 7 | 1 | |
| HRGMv2_1815_CGC27 | CGCFAM_09874 | Yes | 5 | 1 | |
| HRGMv2_1815_CGC37 | CGCFAM_09875 | Yes | 10 | 1 | |
| HRGMv2_1815_CGC50 | CGCFAM_09876 | Yes | 4 | 1 |
Top CAZyme Families