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Cluster: HRGMv2_1815_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_21 HRGMv2_1815_21_1 189 2435 - 8.A.7.1.1
STP HRGMv2_1815_21 HRGMv2_1815_21_2 2448 2975 - NUDIX
pfam HRGMv2_1815_21 HRGMv2_1815_21_3 3660 4337 + MutH
TC HRGMv2_1815_21 HRGMv2_1815_21_4 4437 5147 + 2.A.109.2.3
pfam HRGMv2_1815_21 HRGMv2_1815_21_5 5266 5484 + DUF903
TC HRGMv2_1815_21 HRGMv2_1815_21_6 5625 6665 + 8.A.5.1.5
pfam HRGMv2_1815_21 HRGMv2_1815_21_7 6706 7155 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9
TF HRGMv2_1815_21 HRGMv2_1815_21_8 7155 7949 - GntR
TC HRGMv2_1815_21 HRGMv2_1815_21_9 8024 8341 - 4.A.3.2.6
CAZyme HRGMv2_1815_21 HRGMv2_1815_21_10 8357 9784 - GH1
TC HRGMv2_1815_21 HRGMv2_1815_21_11 9781 11130 - 4.A.3.2.9
TC HRGMv2_1815_21 HRGMv2_1815_21_12 11310 11642 + 4.A.3.2.9
pfam HRGMv2_1815_21 HRGMv2_1815_21_13 11651 12907 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
TF HRGMv2_1815_21 HRGMv2_1815_21_14 12920 13930 + HTH_1
TC HRGMv2_1815_21 HRGMv2_1815_21_15 13927 15090 - 2.A.1.2.65
Gene ID: HRGMv2_1815_21_1
Type: TC
Location: 189 - 2435 (-)
Gene ID: HRGMv2_1815_21_2
Type: STP
Location: 2448 - 2975 (-)
Gene ID: HRGMv2_1815_21_3
Type: pfam
Location: 3660 - 4337 (+)
Gene ID: HRGMv2_1815_21_4
Type: TC
Location: 4437 - 5147 (+)
Gene ID: HRGMv2_1815_21_5
Type: pfam
Location: 5266 - 5484 (+)
Gene ID: HRGMv2_1815_21_6
Type: TC
Location: 5625 - 6665 (+)
Gene ID: HRGMv2_1815_21_7
Type: pfam
Location: 6706 - 7155 (-)
Gene ID: HRGMv2_1815_21_8
Type: TF
Location: 7155 - 7949 (-)
Gene ID: HRGMv2_1815_21_9
Type: TC
Location: 8024 - 8341 (-)
Gene ID: HRGMv2_1815_21_10
Type: CAZyme
Location: 8357 - 9784 (-)
Gene ID: HRGMv2_1815_21_11
Type: TC
Location: 9781 - 11130 (-)
Gene ID: HRGMv2_1815_21_12
Type: TC
Location: 11310 - 11642 (+)
Gene ID: HRGMv2_1815_21_13
Type: pfam
Location: 11651 - 12907 (-)
Gene ID: HRGMv2_1815_21_14
Type: TF
Location: 12920 - 13930 (+)
Gene ID: HRGMv2_1815_21_15
Type: TC
Location: 13927 - 15090 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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