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Cluster: HRGMv2_1815_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_10 HRGMv2_1815_10_158 168821 171670 + 9.B.34.1.2
TF HRGMv2_1815_10 HRGMv2_1815_10_159 171667 172731 - LacI
TC HRGMv2_1815_10 HRGMv2_1815_10_160 172955 174265 + 2.A.1.14.2
CAZyme HRGMv2_1815_10 HRGMv2_1815_10_161 174276 176639 + GH31_2
pfam HRGMv2_1815_10 HRGMv2_1815_10_162 176706 177212 - Ferritin
TC HRGMv2_1815_10 HRGMv2_1815_10_163 177703 178374 + 9.A.5.4.2
TC HRGMv2_1815_10 HRGMv2_1815_10_164 178361 178840 + 9.B.156.1.3
Gene ID: HRGMv2_1815_10_158
Type: TC
Location: 168821 - 171670 (+)
Gene ID: HRGMv2_1815_10_159
Type: TF
Location: 171667 - 172731 (-)
Gene ID: HRGMv2_1815_10_160
Type: TC
Location: 172955 - 174265 (+)
Gene ID: HRGMv2_1815_10_161
Type: CAZyme
Location: 174276 - 176639 (+)
Gene ID: HRGMv2_1815_10_162
Type: pfam
Location: 176706 - 177212 (-)
Gene ID: HRGMv2_1815_10_163
Type: TC
Location: 177703 - 178374 (+)
Gene ID: HRGMv2_1815_10_164
Type: TC
Location: 178361 - 178840 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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