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Genome Details

Selected Rep_genome_ID: HRGMv2_0434
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp017623335
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG452_bin.93 4,152,415 97.41% 0.12% NA Africa H3AfricaPhase2
HRGMv2_0434 4,183,914 99.25% 0% Cameroon Africa HRGM
Rep_163 3,498,684 96.8519% 0.185185% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0434_CGC19 CGCFAM_00001 Yes 12 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0434_CGC12 CGCFAM_00017 Yes 7 2 fructan
HRGMv2_0434_CGC24 CGCFAM_00030 Yes 5 1
HRGMv2_0434_CGC20 CGCFAM_00034 Yes 10 3
HRGMv2_0434_CGC39 CGCFAM_00048 Yes 9 4
HRGMv2_0434_CGC18 CGCFAM_00068 Yes 7 3
HRGMv2_0434_CGC13 CGCFAM_00080 Yes 4 1
HRGMv2_0434_CGC54 CGCFAM_00081 Yes 11 1
HRGMv2_0434_CGC48 CGCFAM_00136 Yes 6 3 pectin
HRGMv2_0434_CGC7 CGCFAM_00306 Yes 9 3
HRGMv2_0434_CGC45 CGCFAM_00542 Yes 10 3
HRGMv2_0434_CGC30 CGCFAM_00552 Yes 5 1
HRGMv2_0434_CGC41 CGCFAM_00794 Yes 6 2
HRGMv2_0434_CGC50 CGCFAM_01240 Yes 3 2 beta-glucan
HRGMv2_0434_CGC28 CGCFAM_01251 Yes 9 5
HRGMv2_0434_CGC42 CGCFAM_01255 Yes 11 4
HRGMv2_0434_CGC36 CGCFAM_01729 Yes 8 3
HRGMv2_0434_CGC33 CGCFAM_02048 Yes 3 1
HRGMv2_0434_CGC17 CGCFAM_02500 Yes 6 2
HRGMv2_0434_CGC21 CGCFAM_02505 Yes 4 1
HRGMv2_0434_CGC51 CGCFAM_03968 Yes 14 11
HRGMv2_0434_CGC31 CGCFAM_04141 Yes 8 4
HRGMv2_0434_CGC40 CGCFAM_04639 Yes 7 3
HRGMv2_0434_CGC16 CGCFAM_04640 Yes 7 1
HRGMv2_0434_CGC15 CGCFAM_04641 Yes 3 2
Top CAZyme Families