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Cluster: HRGMv2_0434_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0434_5 HRGMv2_0434_5_120 144756 146372 - 8.A.46.1.1
TC HRGMv2_0434_5 HRGMv2_0434_5_121 146400 149534 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0434_5 HRGMv2_0434_5_122 150389 150550 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0434_5 HRGMv2_0434_5_123 150628 151689 + LacI
TC HRGMv2_0434_5 HRGMv2_0434_5_124 151768 153114 + 2.A.2.6.2
CAZyme HRGMv2_0434_5 HRGMv2_0434_5_125 153118 155865 + GH77
pfam HRGMv2_0434_5 HRGMv2_0434_5_126 156122 156493 + PDDEXK_3
CAZyme HRGMv2_0434_5 HRGMv2_0434_5_127 156758 158884 + GH97
pfam HRGMv2_0434_5 HRGMv2_0434_5_128 159139 159510 + PDDEXK_3
CAZyme HRGMv2_0434_5 HRGMv2_0434_5_129 159700 161586 + GH13_14
Gene ID: HRGMv2_0434_5_120
Type: TC
Location: 144756 - 146372 (-)
Gene ID: HRGMv2_0434_5_121
Type: TC
Location: 146400 - 149534 (-)
Gene ID: HRGMv2_0434_5_122
Type:
Location: 150389 - 150550 (-)
Gene ID: HRGMv2_0434_5_123
Type: TF
Location: 150628 - 151689 (+)
Gene ID: HRGMv2_0434_5_124
Type: TC
Location: 151768 - 153114 (+)
Gene ID: HRGMv2_0434_5_125
Type: CAZyme
Location: 153118 - 155865 (+)
Gene ID: HRGMv2_0434_5_126
Type: pfam
Location: 156122 - 156493 (+)
Gene ID: HRGMv2_0434_5_127
Type: CAZyme
Location: 156758 - 158884 (+)
Gene ID: HRGMv2_0434_5_128
Type: pfam
Location: 159139 - 159510 (+)
Gene ID: HRGMv2_0434_5_129
Type: CAZyme
Location: 159700 - 161586 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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