Cluster: HRGMv2_0434_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0434
- CGC Family ID: CGCFAM_00794
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0434_23 | HRGMv2_0434_23_23 | 25413 | 27932 | + | GH115 |
| CAZyme | HRGMv2_0434_23 | HRGMv2_0434_23_24 | 27952 | 30732 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_0434_23 | HRGMv2_0434_23_25 | 31171 | 31293 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0434_23 | HRGMv2_0434_23_26 | 31287 | 31688 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0434_23 | HRGMv2_0434_23_27 | 31866 | 32600 | + | 1.B.44.2.1 |
| TC | HRGMv2_0434_23 | HRGMv2_0434_23_28 | 32600 | 33175 | + | 2.A.51.1.6 |
Gene ID: HRGMv2_0434_23_23
Type: CAZyme
Location: 25413 - 27932 (+)
Type: CAZyme
Location: 25413 - 27932 (+)
Gene ID: HRGMv2_0434_23_24
Type: CAZyme
Location: 27952 - 30732 (+)
Type: CAZyme
Location: 27952 - 30732 (+)
Gene ID: HRGMv2_0434_23_25
Type:
Location: 31171 - 31293 (+)
Type:
Location: 31171 - 31293 (+)
Gene ID: HRGMv2_0434_23_26
Type:
Location: 31287 - 31688 (+)
Type:
Location: 31287 - 31688 (+)
Gene ID: HRGMv2_0434_23_27
Type: TC
Location: 31866 - 32600 (+)
Type: TC
Location: 31866 - 32600 (+)
Gene ID: HRGMv2_0434_23_28
Type: TC
Location: 32600 - 33175 (+)
Type: TC
Location: 32600 - 33175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp017623335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.