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Cluster: HRGMv2_0434_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0434_2 HRGMv2_0434_2_34 41806 42966 + 3.D.5.1.1
TC HRGMv2_0434_2 HRGMv2_0434_2_35 42973 43734 + 3.D.5.1.1
TC HRGMv2_0434_2 HRGMv2_0434_2_36 43738 44379 + 3.D.5.1.1
TC HRGMv2_0434_2 HRGMv2_0434_2_37 44383 45009 + 3.D.5.1.1
TC HRGMv2_0434_2 HRGMv2_0434_2_38 45022 46296 + 3.D.5.1.1
CAZyme HRGMv2_0434_2 HRGMv2_0434_2_39 46521 49490 - GH2
pfam HRGMv2_0434_2 HRGMv2_0434_2_40 49645 52452 - OMP_b-brl_3
CAZyme HRGMv2_0434_2 HRGMv2_0434_2_41 52707 55805 - GH2
CAZyme HRGMv2_0434_2 HRGMv2_0434_2_42 55831 60033 - CBM57 | CBM97 | GH137 | GH2
Gene ID: HRGMv2_0434_2_34
Type: TC
Location: 41806 - 42966 (+)
Gene ID: HRGMv2_0434_2_35
Type: TC
Location: 42973 - 43734 (+)
Gene ID: HRGMv2_0434_2_36
Type: TC
Location: 43738 - 44379 (+)
Gene ID: HRGMv2_0434_2_37
Type: TC
Location: 44383 - 45009 (+)
Gene ID: HRGMv2_0434_2_38
Type: TC
Location: 45022 - 46296 (+)
Gene ID: HRGMv2_0434_2_39
Type: CAZyme
Location: 46521 - 49490 (-)
Gene ID: HRGMv2_0434_2_40
Type: pfam
Location: 49645 - 52452 (-)
Gene ID: HRGMv2_0434_2_41
Type: CAZyme
Location: 52707 - 55805 (-)
Gene ID: HRGMv2_0434_2_42
Type: CAZyme
Location: 55831 - 60033 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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