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Cluster: HRGMv2_0434_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0434_4 HRGMv2_0434_4_35 34717 39156 + CE8
pfam HRGMv2_0434_4 HRGMv2_0434_4_36 39286 41184 + E1_dh | Transket_pyr | Transketolase_C | DXP_synthase_N
STP HRGMv2_0434_4 HRGMv2_0434_4_37 41345 42706 + TrkA_C | TrkA_C
TC HRGMv2_0434_4 HRGMv2_0434_4_38 42700 44157 + 2.A.38.1.1
pfam HRGMv2_0434_4 HRGMv2_0434_4_39 44204 45166 + PMI_typeI_cat | MPI_cupin_dom
pfam HRGMv2_0434_4 HRGMv2_0434_4_40 45163 46734 - FAD-depend_C
TC HRGMv2_0434_4 HRGMv2_0434_4_41 46887 48659 - 2.A.49.6.4
Gene ID: HRGMv2_0434_4_35
Type: CAZyme
Location: 34717 - 39156 (+)
Gene ID: HRGMv2_0434_4_36
Type: pfam
Location: 39286 - 41184 (+)
Gene ID: HRGMv2_0434_4_37
Type: STP
Location: 41345 - 42706 (+)
Gene ID: HRGMv2_0434_4_38
Type: TC
Location: 42700 - 44157 (+)
Gene ID: HRGMv2_0434_4_39
Type: pfam
Location: 44204 - 45166 (+)
Gene ID: HRGMv2_0434_4_40
Type: pfam
Location: 45163 - 46734 (-)
Gene ID: HRGMv2_0434_4_41
Type: TC
Location: 46887 - 48659 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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