dbCAN Logo

Cluster: HRGMv2_0434_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0434_21 HRGMv2_0434_21_41 43988 45607 + GH29
CAZyme HRGMv2_0434_21 HRGMv2_0434_21_42 45678 46853 - GT19
pfam HRGMv2_0434_21 HRGMv2_0434_21_43 46855 47688 - SurE
TC HRGMv2_0434_21 HRGMv2_0434_21_44 47748 48512 + 8.A.3.2.3
pfam HRGMv2_0434_21 HRGMv2_0434_21_45 48522 49445 + ParBc | HTH_ParB | ParB_dimer
pfam HRGMv2_0434_21 HRGMv2_0434_21_46 49429 50139 + DUF5683
CAZyme HRGMv2_0434_21 HRGMv2_0434_21_47 50167 51519 + GH23
STP HRGMv2_0434_21 HRGMv2_0434_21_48 51543 53822 + HD
CAZyme HRGMv2_0434_21 HRGMv2_0434_21_49 53894 54871 + CE8
Gene ID: HRGMv2_0434_21_41
Type: CAZyme
Location: 43988 - 45607 (+)
Gene ID: HRGMv2_0434_21_42
Type: CAZyme
Location: 45678 - 46853 (-)
Gene ID: HRGMv2_0434_21_43
Type: pfam
Location: 46855 - 47688 (-)
Gene ID: HRGMv2_0434_21_44
Type: TC
Location: 47748 - 48512 (+)
Gene ID: HRGMv2_0434_21_45
Type: pfam
Location: 48522 - 49445 (+)
Gene ID: HRGMv2_0434_21_46
Type: pfam
Location: 49429 - 50139 (+)
Gene ID: HRGMv2_0434_21_47
Type: CAZyme
Location: 50167 - 51519 (+)
Gene ID: HRGMv2_0434_21_48
Type: STP
Location: 51543 - 53822 (+)
Gene ID: HRGMv2_0434_21_49
Type: CAZyme
Location: 53894 - 54871 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List