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Cluster: HRGMv2_0434_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0434_44 HRGMv2_0434_44_7 5003 6418 - 3.D.1.2.1
TC HRGMv2_0434_44 HRGMv2_0434_44_8 6438 7925 - 3.D.1.5.1
TC HRGMv2_0434_44 HRGMv2_0434_44_9 7965 10004 - 3.D.9.1.1
TC HRGMv2_0434_44 HRGMv2_0434_44_10 10014 10301 - 3.D.1.8.1
TC HRGMv2_0434_44 HRGMv2_0434_44_11 10325 10849 - 3.D.9.1.1
STP HRGMv2_0434_44 HRGMv2_0434_44_12 10865 11389 - Fer4 | Fer4
TC HRGMv2_0434_44 HRGMv2_0434_44_13 11420 12505 - 3.D.1.5.1
TC HRGMv2_0434_44 HRGMv2_0434_44_14 12724 14286 - 3.D.1.5.1
TC HRGMv2_0434_44 HRGMv2_0434_44_15 14309 14968 - 3.D.1.3.1
TC HRGMv2_0434_44 HRGMv2_0434_44_16 14959 15309 - 3.D.1.8.1
CAZyme HRGMv2_0434_44 HRGMv2_0434_44_17 15579 18170 - CE8
Gene ID: HRGMv2_0434_44_7
Type: TC
Location: 5003 - 6418 (-)
Gene ID: HRGMv2_0434_44_8
Type: TC
Location: 6438 - 7925 (-)
Gene ID: HRGMv2_0434_44_9
Type: TC
Location: 7965 - 10004 (-)
Gene ID: HRGMv2_0434_44_10
Type: TC
Location: 10014 - 10301 (-)
Gene ID: HRGMv2_0434_44_11
Type: TC
Location: 10325 - 10849 (-)
Gene ID: HRGMv2_0434_44_12
Type: STP
Location: 10865 - 11389 (-)
Gene ID: HRGMv2_0434_44_13
Type: TC
Location: 11420 - 12505 (-)
Gene ID: HRGMv2_0434_44_14
Type: TC
Location: 12724 - 14286 (-)
Gene ID: HRGMv2_0434_44_15
Type: TC
Location: 14309 - 14968 (-)
Gene ID: HRGMv2_0434_44_16
Type: TC
Location: 14959 - 15309 (-)
Gene ID: HRGMv2_0434_44_17
Type: CAZyme
Location: 15579 - 18170 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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