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Cluster: HRGMv2_0434_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_73 99505 100785 + GH5_7
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_74 100810 102132 + CE7
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_75 102147 103229 + GH26
CAZyme HRGMv2_0434_12 HRGMv2_0434_12_76 103253 104416 + GH130_1
TC HRGMv2_0434_12 HRGMv2_0434_12_77 104429 105772 + 2.A.2.3.4
pfam HRGMv2_0434_12 HRGMv2_0434_12_78 105822 106997 + GlcNAc_2-epim
TF HRGMv2_0434_12 HRGMv2_0434_12_79 107149 108045 + HTH_AraC | HTH_AraC
TC HRGMv2_0434_12 HRGMv2_0434_12_80 108590 111829 + 1.B.14.6.1
Gene ID: HRGMv2_0434_12_73
Type: CAZyme
Location: 99505 - 100785 (+)
Gene ID: HRGMv2_0434_12_74
Type: CAZyme
Location: 100810 - 102132 (+)
Gene ID: HRGMv2_0434_12_75
Type: CAZyme
Location: 102147 - 103229 (+)
Gene ID: HRGMv2_0434_12_76
Type: CAZyme
Location: 103253 - 104416 (+)
Gene ID: HRGMv2_0434_12_77
Type: TC
Location: 104429 - 105772 (+)
Gene ID: HRGMv2_0434_12_78
Type: pfam
Location: 105822 - 106997 (+)
Gene ID: HRGMv2_0434_12_79
Type: TF
Location: 107149 - 108045 (+)
Gene ID: HRGMv2_0434_12_80
Type: TC
Location: 108590 - 111829 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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