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Cluster: HRGMv2_0434_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0434_23 HRGMv2_0434_23_46 49952 51640 + 2.A.58.2.2
STP HRGMv2_0434_23 HRGMv2_0434_23_47 52054 52575 - NUDIX
CAZyme HRGMv2_0434_23 HRGMv2_0434_23_48 52611 54068 - CE20
CAZyme HRGMv2_0434_23 HRGMv2_0434_23_49 54134 56563 - GH95
CAZyme HRGMv2_0434_23 HRGMv2_0434_23_50 56565 57869 - CE19
peptidase HRGMv2_0434_23 HRGMv2_0434_23_51 58063 59322 + M16.UPB
pfam HRGMv2_0434_23 HRGMv2_0434_23_52 59326 59919 - Form_Nir_trans
CAZyme HRGMv2_0434_23 HRGMv2_0434_23_53 59937 60980 - GT9
pfam HRGMv2_0434_23 HRGMv2_0434_23_54 61037 61639 - DUF4254
pfam HRGMv2_0434_23 HRGMv2_0434_23_55 61709 62803 + 2-Hacid_dh | 2-Hacid_dh_C
TC HRGMv2_0434_23 HRGMv2_0434_23_56 62929 63165 + 3.D.1.6.4
Gene ID: HRGMv2_0434_23_46
Type: TC
Location: 49952 - 51640 (+)
Gene ID: HRGMv2_0434_23_47
Type: STP
Location: 52054 - 52575 (-)
Gene ID: HRGMv2_0434_23_48
Type: CAZyme
Location: 52611 - 54068 (-)
Gene ID: HRGMv2_0434_23_49
Type: CAZyme
Location: 54134 - 56563 (-)
Gene ID: HRGMv2_0434_23_50
Type: CAZyme
Location: 56565 - 57869 (-)
Gene ID: HRGMv2_0434_23_51
Type: peptidase
Location: 58063 - 59322 (+)
Gene ID: HRGMv2_0434_23_52
Type: pfam
Location: 59326 - 59919 (-)
Gene ID: HRGMv2_0434_23_53
Type: CAZyme
Location: 59937 - 60980 (-)
Gene ID: HRGMv2_0434_23_54
Type: pfam
Location: 61037 - 61639 (-)
Gene ID: HRGMv2_0434_23_55
Type: pfam
Location: 61709 - 62803 (+)
Gene ID: HRGMv2_0434_23_56
Type: TC
Location: 62929 - 63165 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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