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Genome Details

Selected Rep_genome_ID: HRGMv2_0354
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→
Species
Lepagella sp900554845
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0354 3,513,824 98.55% 1.257% UK Europe HRGM
MGYG000002762 3,275,168 96.42% 1.89% Netherlands Europe UHGG
Rep_302 2,881,307 95.5346% 0.880503% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0354_CGC3 CGCFAM_00002 Yes 4 1
HRGMv2_0354_CGC50 CGCFAM_00018 Yes 7 2
HRGMv2_0354_CGC31 CGCFAM_00023 Yes 5 2
HRGMv2_0354_CGC9 CGCFAM_00043 Yes 9 3 alpha-glucan
HRGMv2_0354_CGC5 CGCFAM_00044 Yes 11 6 beta-mannan/xylan/beta-glucan
HRGMv2_0354_CGC34 CGCFAM_00062 Yes 8 2 beta-glucan
HRGMv2_0354_CGC20 CGCFAM_00071 Yes 6 2
HRGMv2_0354_CGC32 CGCFAM_00096 Yes 9 5
HRGMv2_0354_CGC16 CGCFAM_00109 Yes 10 5 host glycan
HRGMv2_0354_CGC24 CGCFAM_00225 Yes 9 4 arabinogalactan
HRGMv2_0354_CGC37 CGCFAM_00296 Yes 6 2
HRGMv2_0354_CGC2 CGCFAM_00356 Yes 9 1
HRGMv2_0354_CGC38 CGCFAM_00375 Yes 6 3
HRGMv2_0354_CGC7 CGCFAM_00395 Yes 29 5
HRGMv2_0354_CGC19 CGCFAM_00574 Yes 4 1
HRGMv2_0354_CGC8 CGCFAM_00860 Yes 3 1
HRGMv2_0354_CGC25 CGCFAM_00997 Yes 3 1
HRGMv2_0354_CGC33 CGCFAM_01067 Yes 4 1
HRGMv2_0354_CGC36 CGCFAM_01079 Yes 10 5 beta-glucan
HRGMv2_0354_CGC40 CGCFAM_01483 Yes 11 5
HRGMv2_0354_CGC23 CGCFAM_01787 Yes 9 1
HRGMv2_0354_CGC30 CGCFAM_01887 Yes 4 1
HRGMv2_0354_CGC18 CGCFAM_02250 Yes 7 1
HRGMv2_0354_CGC10 CGCFAM_03587 Yes 4 1
HRGMv2_0354_CGC1 CGCFAM_03811 Yes 8 1
Top CAZyme Families