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Cluster: HRGMv2_0354_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0354_16 HRGMv2_0354_16_55 67341 68345 + GT2
CAZyme HRGMv2_0354_16 HRGMv2_0354_16_56 68577 69488 + GT8
pfam HRGMv2_0354_16 HRGMv2_0354_16_57 69827 71359 + Polysacc_synt
CAZyme HRGMv2_0354_16 HRGMv2_0354_16_58 71576 72643 + GT4
pfam HRGMv2_0354_16 HRGMv2_0354_16_59 72679 73809 + EpsG
pfam HRGMv2_0354_16 HRGMv2_0354_16_60 73837 74571 + DUF1919
TC HRGMv2_0354_16 HRGMv2_0354_16_61 74718 76832 + 1.A.77.1.10
CAZyme HRGMv2_0354_16 HRGMv2_0354_16_62 77505 78617 + GT4
CAZyme HRGMv2_0354_16 HRGMv2_0354_16_63 78617 79483 + GT2
Gene ID: HRGMv2_0354_16_55
Type: CAZyme
Location: 67341 - 68345 (+)
Gene ID: HRGMv2_0354_16_56
Type: CAZyme
Location: 68577 - 69488 (+)
Gene ID: HRGMv2_0354_16_57
Type: pfam
Location: 69827 - 71359 (+)
Gene ID: HRGMv2_0354_16_58
Type: CAZyme
Location: 71576 - 72643 (+)
Gene ID: HRGMv2_0354_16_59
Type: pfam
Location: 72679 - 73809 (+)
Gene ID: HRGMv2_0354_16_60
Type: pfam
Location: 73837 - 74571 (+)
Gene ID: HRGMv2_0354_16_61
Type: TC
Location: 74718 - 76832 (+)
Gene ID: HRGMv2_0354_16_62
Type: CAZyme
Location: 77505 - 78617 (+)
Gene ID: HRGMv2_0354_16_63
Type: CAZyme
Location: 78617 - 79483 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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