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Cluster: HRGMv2_0354_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0354_10 HRGMv2_0354_10_69 85515 87605 + 2.A.9.3.2
STP HRGMv2_0354_10 HRGMv2_0354_10_70 87624 88451 + Fer4 | Fer4
sulfatase HRGMv2_0354_10 HRGMv2_0354_10_71 88493 89287 - S1_63
TC HRGMv2_0354_10 HRGMv2_0354_10_72 89547 89783 + 3.D.1.6.4
pfam HRGMv2_0354_10 HRGMv2_0354_10_73 89814 91079 + ketoacyl-synt | Ketoacyl-synt_C
STP HRGMv2_0354_10 HRGMv2_0354_10_74 91267 93255 + HATPase_c
CAZyme HRGMv2_0354_10 HRGMv2_0354_10_75 93266 94534 - GT4
pfam HRGMv2_0354_10 HRGMv2_0354_10_76 94531 95124 - DHFR_1
TC HRGMv2_0354_10 HRGMv2_0354_10_77 95240 97039 + 2.A.58.2.2
Gene ID: HRGMv2_0354_10_69
Type: TC
Location: 85515 - 87605 (+)
Gene ID: HRGMv2_0354_10_70
Type: STP
Location: 87624 - 88451 (+)
Gene ID: HRGMv2_0354_10_71
Type: sulfatase
Location: 88493 - 89287 (-)
Gene ID: HRGMv2_0354_10_72
Type: TC
Location: 89547 - 89783 (+)
Gene ID: HRGMv2_0354_10_73
Type: pfam
Location: 89814 - 91079 (+)
Gene ID: HRGMv2_0354_10_74
Type: STP
Location: 91267 - 93255 (+)
Gene ID: HRGMv2_0354_10_75
Type: CAZyme
Location: 93266 - 94534 (-)
Gene ID: HRGMv2_0354_10_76
Type: pfam
Location: 94531 - 95124 (-)
Gene ID: HRGMv2_0354_10_77
Type: TC
Location: 95240 - 97039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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