Cluster: HRGMv2_0354_CGC40
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0354
- CGC Family ID: CGCFAM_01483
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0354_20 | HRGMv2_0354_20_38 | 54593 | 56842 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_0354_20 | HRGMv2_0354_20_39 | 57065 | 57199 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0354_20 | HRGMv2_0354_20_40 | 57209 | 59038 | - | GH36 |
| CAZyme | HRGMv2_0354_20 | HRGMv2_0354_20_41 | 59188 | 60165 | - | GH43_3 |
| NULL(UNKNOWN) | HRGMv2_0354_20 | HRGMv2_0354_20_42 | 60331 | 60459 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0354_20 | HRGMv2_0354_20_43 | 60396 | 62195 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0354_20 | HRGMv2_0354_20_44 | 62223 | 65741 | - | 1.B.14.6.1 |
| STP | HRGMv2_0354_20 | HRGMv2_0354_20_45 | 65802 | 66815 | - | FecR |
| TF | HRGMv2_0354_20 | HRGMv2_0354_20_46 | 66840 | 67394 | - | GerE |
| CAZyme | HRGMv2_0354_20 | HRGMv2_0354_20_47 | 67411 | 69258 | - | GH43_3 |
| CAZyme | HRGMv2_0354_20 | HRGMv2_0354_20_48 | 69300 | 70331 | - | GH43_3 |
Gene ID: HRGMv2_0354_20_38
Type: CAZyme
Location: 54593 - 56842 (-)
Type: CAZyme
Location: 54593 - 56842 (-)
Gene ID: HRGMv2_0354_20_39
Type:
Location: 57065 - 57199 (-)
Type:
Location: 57065 - 57199 (-)
Gene ID: HRGMv2_0354_20_40
Type: CAZyme
Location: 57209 - 59038 (-)
Type: CAZyme
Location: 57209 - 59038 (-)
Gene ID: HRGMv2_0354_20_41
Type: CAZyme
Location: 59188 - 60165 (-)
Type: CAZyme
Location: 59188 - 60165 (-)
Gene ID: HRGMv2_0354_20_42
Type:
Location: 60331 - 60459 (+)
Type:
Location: 60331 - 60459 (+)
Gene ID: HRGMv2_0354_20_43
Type: pfam
Location: 60396 - 62195 (-)
Type: pfam
Location: 60396 - 62195 (-)
Gene ID: HRGMv2_0354_20_44
Type: TC
Location: 62223 - 65741 (-)
Type: TC
Location: 62223 - 65741 (-)
Gene ID: HRGMv2_0354_20_45
Type: STP
Location: 65802 - 66815 (-)
Type: STP
Location: 65802 - 66815 (-)
Gene ID: HRGMv2_0354_20_46
Type: TF
Location: 66840 - 67394 (-)
Type: TF
Location: 66840 - 67394 (-)
Gene ID: HRGMv2_0354_20_47
Type: CAZyme
Location: 67411 - 69258 (-)
Type: CAZyme
Location: 67411 - 69258 (-)
Gene ID: HRGMv2_0354_20_48
Type: CAZyme
Location: 69300 - 70331 (-)
Type: CAZyme
Location: 69300 - 70331 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900554845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.