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Cluster: HRGMv2_0354_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0354_19 HRGMv2_0354_19_41 43482 45062 + CBM91 | GH43_12
CAZyme HRGMv2_0354_19 HRGMv2_0354_19_42 45092 47161 + GH42
CAZyme HRGMv2_0354_19 HRGMv2_0354_19_43 47177 49042 + GH97
CAZyme HRGMv2_0354_19 HRGMv2_0354_19_44 49077 50693 + GH29
TC HRGMv2_0354_19 HRGMv2_0354_19_45 50962 54141 + 1.B.14.6.1
pfam HRGMv2_0354_19 HRGMv2_0354_19_46 54153 55820 + SusD_RagB | SusD-like_3
pfam HRGMv2_0354_19 HRGMv2_0354_19_47 55820 57298 + SGBP_B_XBD
CAZyme HRGMv2_0354_19 HRGMv2_0354_19_48 57307 58773 + GH5_4
NULL(UNKNOWN) HRGMv2_0354_19 HRGMv2_0354_19_49 58886 59107 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0354_19 HRGMv2_0354_19_50 59104 59643 - 2.A.115.2.8
Gene ID: HRGMv2_0354_19_41
Type: CAZyme
Location: 43482 - 45062 (+)
Gene ID: HRGMv2_0354_19_42
Type: CAZyme
Location: 45092 - 47161 (+)
Gene ID: HRGMv2_0354_19_43
Type: CAZyme
Location: 47177 - 49042 (+)
Gene ID: HRGMv2_0354_19_44
Type: CAZyme
Location: 49077 - 50693 (+)
Gene ID: HRGMv2_0354_19_45
Type: TC
Location: 50962 - 54141 (+)
Gene ID: HRGMv2_0354_19_46
Type: pfam
Location: 54153 - 55820 (+)
Gene ID: HRGMv2_0354_19_47
Type: pfam
Location: 55820 - 57298 (+)
Gene ID: HRGMv2_0354_19_48
Type: CAZyme
Location: 57307 - 58773 (+)
Gene ID: HRGMv2_0354_19_49
Type:
Location: 58886 - 59107 (-)
Gene ID: HRGMv2_0354_19_50
Type: TC
Location: 59104 - 59643 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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