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Cluster: HRGMv2_0354_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0354_4 HRGMv2_0354_4_73 84414 85445 + 2.A.98.1.3
NULL(UNKNOWN) HRGMv2_0354_4 HRGMv2_0354_4_74 85776 87572 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0354_4 HRGMv2_0354_4_75 87816 90149 + GH31_15
pfam HRGMv2_0354_4 HRGMv2_0354_4_76 90204 91895 + DUF6377
TC HRGMv2_0354_4 HRGMv2_0354_4_77 92141 95134 + 1.B.14.6.1
TC HRGMv2_0354_4 HRGMv2_0354_4_78 95149 96645 + 8.A.46.1.5
pfam HRGMv2_0354_4 HRGMv2_0354_4_79 96694 98199 + SusE | SusF_SusE | SusF_SusE
CAZyme HRGMv2_0354_4 HRGMv2_0354_4_80 98199 100013 + GH66
CAZyme HRGMv2_0354_4 HRGMv2_0354_4_81 100027 102165 + GH97
Gene ID: HRGMv2_0354_4_73
Type: TC
Location: 84414 - 85445 (+)
Gene ID: HRGMv2_0354_4_74
Type:
Location: 85776 - 87572 (+)
Gene ID: HRGMv2_0354_4_75
Type: CAZyme
Location: 87816 - 90149 (+)
Gene ID: HRGMv2_0354_4_76
Type: pfam
Location: 90204 - 91895 (+)
Gene ID: HRGMv2_0354_4_77
Type: TC
Location: 92141 - 95134 (+)
Gene ID: HRGMv2_0354_4_78
Type: TC
Location: 95149 - 96645 (+)
Gene ID: HRGMv2_0354_4_79
Type: pfam
Location: 96694 - 98199 (+)
Gene ID: HRGMv2_0354_4_80
Type: CAZyme
Location: 98199 - 100013 (+)
Gene ID: HRGMv2_0354_4_81
Type: CAZyme
Location: 100027 - 102165 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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