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Cluster: HRGMv2_0354_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0354_1 HRGMv2_0354_1_242 290520 291689 - 3.B.1.1.3
pfam HRGMv2_0354_1 HRGMv2_0354_1_243 291714 292166 - Biotin_lipoyl | RnfC_N
pfam HRGMv2_0354_1 HRGMv2_0354_1_244 292182 292796 - OAD_gamma
TC HRGMv2_0354_1 HRGMv2_0354_1_245 292852 294405 - 3.B.1.1.2
STP HRGMv2_0354_1 HRGMv2_0354_1_246 294462 294884 - Glyoxalase
pfam HRGMv2_0354_1 HRGMv2_0354_1_247 295225 296220 + Hexapep | LpxD
CAZyme HRGMv2_0354_1 HRGMv2_0354_1_248 296230 297612 + CE11
pfam HRGMv2_0354_1 HRGMv2_0354_1_249 297641 298414 + Hexapep | Hexapep | Acetyltransf_11
TC HRGMv2_0354_1 HRGMv2_0354_1_250 298511 299101 - 9.B.18.1.2
Gene ID: HRGMv2_0354_1_242
Type: TC
Location: 290520 - 291689 (-)
Gene ID: HRGMv2_0354_1_243
Type: pfam
Location: 291714 - 292166 (-)
Gene ID: HRGMv2_0354_1_244
Type: pfam
Location: 292182 - 292796 (-)
Gene ID: HRGMv2_0354_1_245
Type: TC
Location: 292852 - 294405 (-)
Gene ID: HRGMv2_0354_1_246
Type: STP
Location: 294462 - 294884 (-)
Gene ID: HRGMv2_0354_1_247
Type: pfam
Location: 295225 - 296220 (+)
Gene ID: HRGMv2_0354_1_248
Type: CAZyme
Location: 296230 - 297612 (+)
Gene ID: HRGMv2_0354_1_249
Type: pfam
Location: 297641 - 298414 (+)
Gene ID: HRGMv2_0354_1_250
Type: TC
Location: 298511 - 299101 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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