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Cluster: HRGMv2_0354_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0354_7 HRGMv2_0354_7_35 35951 36949 + GH43_31
TF HRGMv2_0354_7 HRGMv2_0354_7_36 37094 41110 + HTH_AraC
TC HRGMv2_0354_7 HRGMv2_0354_7_37 41412 44450 + 1.B.14.6.1
pfam HRGMv2_0354_7 HRGMv2_0354_7_38 44480 46060 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0354_7 HRGMv2_0354_7_39 46078 47193 + GH43_3
pfam HRGMv2_0354_7 HRGMv2_0354_7_40 47288 49231 + FG-GAP_3
NULL(UNKNOWN) HRGMv2_0354_7 HRGMv2_0354_7_41 49309 49899 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0354_7 HRGMv2_0354_7_42 49922 51940 + GH93
CAZyme HRGMv2_0354_7 HRGMv2_0354_7_43 51953 53791 + GH2
CAZyme HRGMv2_0354_7 HRGMv2_0354_7_44 53814 55823 + GH182
Gene ID: HRGMv2_0354_7_35
Type: CAZyme
Location: 35951 - 36949 (+)
Gene ID: HRGMv2_0354_7_36
Type: TF
Location: 37094 - 41110 (+)
Gene ID: HRGMv2_0354_7_37
Type: TC
Location: 41412 - 44450 (+)
Gene ID: HRGMv2_0354_7_38
Type: pfam
Location: 44480 - 46060 (+)
Gene ID: HRGMv2_0354_7_39
Type: CAZyme
Location: 46078 - 47193 (+)
Gene ID: HRGMv2_0354_7_40
Type: pfam
Location: 47288 - 49231 (+)
Gene ID: HRGMv2_0354_7_41
Type:
Location: 49309 - 49899 (+)
Gene ID: HRGMv2_0354_7_42
Type: CAZyme
Location: 49922 - 51940 (+)
Gene ID: HRGMv2_0354_7_43
Type: CAZyme
Location: 51953 - 53791 (+)
Gene ID: HRGMv2_0354_7_44
Type: CAZyme
Location: 53814 - 55823 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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