dbCAN Logo

Cluster: HRGMv2_0354_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0354_17 HRGMv2_0354_17_21 23085 26330 + 1.B.14.6.1
pfam HRGMv2_0354_17 HRGMv2_0354_17_22 26344 28341 + SusD_RagB | SusD-like_3
pfam HRGMv2_0354_17 HRGMv2_0354_17_23 28501 30213 + DUF6377 | DUF6377
TC HRGMv2_0354_17 HRGMv2_0354_17_24 30454 33423 + 1.B.14.6.1
pfam HRGMv2_0354_17 HRGMv2_0354_17_25 33438 34970 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0354_17 HRGMv2_0354_17_26 34990 36471 + GH30_3
pfam HRGMv2_0354_17 HRGMv2_0354_17_27 36497 38518 + DUF5016 | DUF5125 | DUF5125 | DUF5121 | DUF5121
CAZyme HRGMv2_0354_17 HRGMv2_0354_17_28 38556 40808 + GH3
Gene ID: HRGMv2_0354_17_21
Type: TC
Location: 23085 - 26330 (+)
Gene ID: HRGMv2_0354_17_22
Type: pfam
Location: 26344 - 28341 (+)
Gene ID: HRGMv2_0354_17_23
Type: pfam
Location: 28501 - 30213 (+)
Gene ID: HRGMv2_0354_17_24
Type: TC
Location: 30454 - 33423 (+)
Gene ID: HRGMv2_0354_17_25
Type: pfam
Location: 33438 - 34970 (+)
Gene ID: HRGMv2_0354_17_26
Type: CAZyme
Location: 34990 - 36471 (+)
Gene ID: HRGMv2_0354_17_27
Type: pfam
Location: 36497 - 38518 (+)
Gene ID: HRGMv2_0354_17_28
Type: CAZyme
Location: 38556 - 40808 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List