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Cluster: HRGMv2_0354_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0354_11 HRGMv2_0354_11_61 80724 83750 - 1.B.14.6.1
CAZyme HRGMv2_0354_11 HRGMv2_0354_11_62 83804 86251 - GH127
CAZyme HRGMv2_0354_11 HRGMv2_0354_11_63 86568 88547 + GH97
CAZyme HRGMv2_0354_11 HRGMv2_0354_11_64 88558 90966 + CBM32 | GH43_34
CAZyme HRGMv2_0354_11 HRGMv2_0354_11_65 90989 93397 + GH127
TC HRGMv2_0354_11 HRGMv2_0354_11_66 93496 94281 - 3.A.1.27.5
TC HRGMv2_0354_11 HRGMv2_0354_11_67 94278 95024 - 3.A.1.27.1
pfam HRGMv2_0354_11 HRGMv2_0354_11_68 95147 95755 + PRK
TC HRGMv2_0354_11 HRGMv2_0354_11_69 95752 96696 + 1.B.42.1.2
Gene ID: HRGMv2_0354_11_61
Type: TC
Location: 80724 - 83750 (-)
Gene ID: HRGMv2_0354_11_62
Type: CAZyme
Location: 83804 - 86251 (-)
Gene ID: HRGMv2_0354_11_63
Type: CAZyme
Location: 86568 - 88547 (+)
Gene ID: HRGMv2_0354_11_64
Type: CAZyme
Location: 88558 - 90966 (+)
Gene ID: HRGMv2_0354_11_65
Type: CAZyme
Location: 90989 - 93397 (+)
Gene ID: HRGMv2_0354_11_66
Type: TC
Location: 93496 - 94281 (-)
Gene ID: HRGMv2_0354_11_67
Type: TC
Location: 94278 - 95024 (-)
Gene ID: HRGMv2_0354_11_68
Type: pfam
Location: 95147 - 95755 (+)
Gene ID: HRGMv2_0354_11_69
Type: TC
Location: 95752 - 96696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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