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Genome Details

Selected Rep_genome_ID: HRGMv2_0217
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900544825
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
GH029_bin.59 3,866,926 95.95% 1.89% NA Africa H3AfricaPhase2
HRGMv2_0217 3,377,885 95.43% 0.506% NA Europe HRGM
MGYG000002080 3,221,264 96.62% 1.01% Netherlands Europe UHGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0217_CGC24 CGCFAM_00001 Yes 7 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0217_CGC36 CGCFAM_00001 Yes 7 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0217_CGC1 CGCFAM_00023 Yes 5 3
HRGMv2_0217_CGC14 CGCFAM_00031 Yes 8 2 pectin/galactan
HRGMv2_0217_CGC40 CGCFAM_00034 Yes 9 4
HRGMv2_0217_CGC8 CGCFAM_00048 Yes 10 3
HRGMv2_0217_CGC38 CGCFAM_00116 Yes 6 2 xylan/beta-glucan
HRGMv2_0217_CGC45 CGCFAM_00165 Yes 5 1
PUL0765_HRGMv2_0217_C0 CGCFAM_00240 Yes 8 2 fructan
HRGMv2_0217_CGC10 CGCFAM_00241 Yes 4 3
HRGMv2_0217_CGC5 CGCFAM_00379 Yes 4 1
HRGMv2_0217_CGC17 CGCFAM_00551 Yes 4 1
HRGMv2_0217_CGC32 CGCFAM_00608 Yes 3 1
HRGMv2_0217_CGC30 CGCFAM_01101 Yes 3 2
HRGMv2_0217_CGC3 CGCFAM_01208 Yes 5 2
HRGMv2_0217_CGC48 CGCFAM_01311 Yes 9 4
HRGMv2_0217_CGC6 CGCFAM_01477 Yes 8 4
HRGMv2_0217_CGC20 CGCFAM_01606 Yes 4 1
HRGMv2_0217_CGC31 CGCFAM_02032 Yes 3 1
HRGMv2_0217_CGC18 CGCFAM_02564 Yes 7 2
HRGMv2_0217_CGC27 CGCFAM_02608 Yes 4 2
HRGMv2_0217_CGC34 CGCFAM_02869 Yes 12 3
PUL0766_HRGMv2_0217_C3 CGCFAM_02924 Yes 4 1 alpha-glucan
HRGMv2_0217_CGC37 CGCFAM_02925 Yes 7 3
HRGMv2_0217_CGC22 CGCFAM_04803 Yes 13 3
Top CAZyme Families