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Cluster: HRGMv2_0217_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0217_189 HRGMv2_0217_189_48 60156 61136 - GT2
CAZyme HRGMv2_0217_189 HRGMv2_0217_189_49 61091 62125 - GT2
pfam HRGMv2_0217_189 HRGMv2_0217_189_50 62168 64192 - PorZ_N_b_propeller
CAZyme HRGMv2_0217_189 HRGMv2_0217_189_51 64189 65106 - GT2
sulfatase HRGMv2_0217_189 HRGMv2_0217_189_52 65099 65716 - S1_7
TC HRGMv2_0217_189 HRGMv2_0217_189_53 65722 66675 - 2.A.115.1.2
pfam HRGMv2_0217_189 HRGMv2_0217_189_54 66753 69614 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
TF HRGMv2_0217_189 HRGMv2_0217_189_55 69755 71209 - 0040266
CAZyme HRGMv2_0217_189 HRGMv2_0217_189_56 71690 72883 - GH110
Gene ID: HRGMv2_0217_189_48
Type: CAZyme
Location: 60156 - 61136 (-)
Gene ID: HRGMv2_0217_189_49
Type: CAZyme
Location: 61091 - 62125 (-)
Gene ID: HRGMv2_0217_189_50
Type: pfam
Location: 62168 - 64192 (-)
Gene ID: HRGMv2_0217_189_51
Type: CAZyme
Location: 64189 - 65106 (-)
Gene ID: HRGMv2_0217_189_52
Type: sulfatase
Location: 65099 - 65716 (-)
Gene ID: HRGMv2_0217_189_53
Type: TC
Location: 65722 - 66675 (-)
Gene ID: HRGMv2_0217_189_54
Type: pfam
Location: 66753 - 69614 (-)
Gene ID: HRGMv2_0217_189_55
Type: TF
Location: 69755 - 71209 (-)
Gene ID: HRGMv2_0217_189_56
Type: CAZyme
Location: 71690 - 72883 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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