Cluster: HRGMv2_0217_CGC37
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0217
- CGC Family ID: CGCFAM_02925
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0217_159 | HRGMv2_0217_159_1 | 291 | 2027 | - | GH13_44 |
| CAZyme | HRGMv2_0217_159 | HRGMv2_0217_159_2 | 2086 | 3387 | - | GH97 |
| CAZyme | HRGMv2_0217_159 | HRGMv2_0217_159_3 | 3333 | 4187 | - | GH97 |
| TC | HRGMv2_0217_159 | HRGMv2_0217_159_4 | 4217 | 5944 | - | 8.A.46.1.1 |
| TC | HRGMv2_0217_159 | HRGMv2_0217_159_5 | 6016 | 8991 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0217_159 | HRGMv2_0217_159_6 | 9222 | 10859 | + | DUF6377 |
| TC | HRGMv2_0217_159 | HRGMv2_0217_159_7 | 11009 | 13825 | + | 1.B.14.12.3 |
Gene ID: HRGMv2_0217_159_1
Type: CAZyme
Location: 291 - 2027 (-)
Type: CAZyme
Location: 291 - 2027 (-)
Gene ID: HRGMv2_0217_159_2
Type: CAZyme
Location: 2086 - 3387 (-)
Type: CAZyme
Location: 2086 - 3387 (-)
Gene ID: HRGMv2_0217_159_3
Type: CAZyme
Location: 3333 - 4187 (-)
Type: CAZyme
Location: 3333 - 4187 (-)
Gene ID: HRGMv2_0217_159_4
Type: TC
Location: 4217 - 5944 (-)
Type: TC
Location: 4217 - 5944 (-)
Gene ID: HRGMv2_0217_159_5
Type: TC
Location: 6016 - 8991 (-)
Type: TC
Location: 6016 - 8991 (-)
Gene ID: HRGMv2_0217_159_6
Type: pfam
Location: 9222 - 10859 (+)
Type: pfam
Location: 9222 - 10859 (+)
Gene ID: HRGMv2_0217_159_7
Type: TC
Location: 11009 - 13825 (+)
Type: TC
Location: 11009 - 13825 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0217_159_5 | vegetarian > vegan | 1.09772 | 0.01274 |