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Cluster: HRGMv2_0217_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0217_58 HRGMv2_0217_58_4 4396 5385 - CE8
STP HRGMv2_0217_58 HRGMv2_0217_58_5 5533 7815 - HD
CAZyme HRGMv2_0217_58 HRGMv2_0217_58_6 7903 9261 - GH23
pfam HRGMv2_0217_58 HRGMv2_0217_58_7 9349 9744 - DUF5683
pfam HRGMv2_0217_58 HRGMv2_0217_58_8 10193 11104 - ParBc | HTH_ParB | ParB_dimer
TC HRGMv2_0217_58 HRGMv2_0217_58_9 11167 11931 - 8.A.3.2.3
pfam HRGMv2_0217_58 HRGMv2_0217_58_10 12110 12859 + SurE
CAZyme HRGMv2_0217_58 HRGMv2_0217_58_11 12926 14353 + GT19
pfam HRGMv2_0217_58 HRGMv2_0217_58_12 14452 15318 - CTP_transf_1
TC HRGMv2_0217_58 HRGMv2_0217_58_13 15330 17429 - 3.A.16.1.1
Gene ID: HRGMv2_0217_58_4
Type: CAZyme
Location: 4396 - 5385 (-)
Gene ID: HRGMv2_0217_58_5
Type: STP
Location: 5533 - 7815 (-)
Gene ID: HRGMv2_0217_58_6
Type: CAZyme
Location: 7903 - 9261 (-)
Gene ID: HRGMv2_0217_58_7
Type: pfam
Location: 9349 - 9744 (-)
Gene ID: HRGMv2_0217_58_8
Type: pfam
Location: 10193 - 11104 (-)
Gene ID: HRGMv2_0217_58_9
Type: TC
Location: 11167 - 11931 (-)
Gene ID: HRGMv2_0217_58_10
Type: pfam
Location: 12110 - 12859 (+)
Gene ID: HRGMv2_0217_58_11
Type: CAZyme
Location: 12926 - 14353 (+)
Gene ID: HRGMv2_0217_58_12
Type: pfam
Location: 14452 - 15318 (-)
Gene ID: HRGMv2_0217_58_13
Type: TC
Location: 15330 - 17429 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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