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Cluster: HRGMv2_0217_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0217_150 HRGMv2_0217_150_30 41999 45208 + 1.B.14.6.1
pfam HRGMv2_0217_150 HRGMv2_0217_150_31 45216 47183 + SusD_RagB | SusD-like_3
pfam HRGMv2_0217_150 HRGMv2_0217_150_32 47240 48106 + F5_F8_type_C
TC HRGMv2_0217_150 HRGMv2_0217_150_33 48427 51564 + 1.B.14.6.1
pfam HRGMv2_0217_150 HRGMv2_0217_150_34 51598 53505 + SusD_RagB | SusD-like_3
pfam HRGMv2_0217_150 HRGMv2_0217_150_35 53566 54030 + DUF5018-rel
CAZyme HRGMv2_0217_150 HRGMv2_0217_150_36 54168 56201 + GH36
Gene ID: HRGMv2_0217_150_30
Type: TC
Location: 41999 - 45208 (+)
Gene ID: HRGMv2_0217_150_31
Type: pfam
Location: 45216 - 47183 (+)
Gene ID: HRGMv2_0217_150_32
Type: pfam
Location: 47240 - 48106 (+)
Gene ID: HRGMv2_0217_150_33
Type: TC
Location: 48427 - 51564 (+)
Gene ID: HRGMv2_0217_150_34
Type: pfam
Location: 51598 - 53505 (+)
Gene ID: HRGMv2_0217_150_35
Type: pfam
Location: 53566 - 54030 (+)
Gene ID: HRGMv2_0217_150_36
Type: CAZyme
Location: 54168 - 56201 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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