Genome Details
Selected Rep_genome_ID: CGMR096096
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR096096 | 5,104,243 | 98.86% | 0.51% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR096096_CGC2 | CGCFAM_00003 | Yes | 13 | 4 | |
| CGMR096096_CGC24 | CGCFAM_00150 | Yes | 7 | 1 | |
| CGMR096096_CGC1 | CGCFAM_00359 | Yes | 7 | 1 | |
| CGMR096096_CGC27 | CGCFAM_01364 | Yes | 10 | 1 | |
| CGMR096096_CGC16 | CGCFAM_01751 | Yes | 6 | 1 | |
| CGMR096096_CGC10 | CGCFAM_02108 | Yes | 3 | 1 | |
| CGMR096096_CGC29 | CGCFAM_03927 | Yes | 10 | 1 | |
| CGMR096096_CGC20 | CGCFAM_05828 | Yes | 5 | 1 | |
| CGMR096096_CGC33 | CGCFAM_05829 | Yes | 3 | 1 | |
| CGMR096096_CGC30 | CGCFAM_09157 | Yes | 7 | 2 | |
| CGMR096096_CGC34 | CGCFAM_09159 | Yes | 12 | 8 | |
| CGMR096096_CGC35 | CGCFAM_09161 | Yes | 10 | 1 | |
| CGMR096096_CGC5 | CGCFAM_09162 | Yes | 4 | 1 | |
| CGMR096096_CGC8 | CGCFAM_09163 | Yes | 4 | 1 | |
| CGMR096096_CGC9 | CGCFAM_09164 | Yes | 13 | 6 |
Top CAZyme Families