Cluster: CGMR096096_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- CGC Family ID: CGCFAM_05829
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12465 | k141_12465_1 | 2 | 820 | - | 1.B.6.1.3 |
| peptidase | k141_12465 | k141_12465_2 | 919 | 2064 | - | S12.A11 |
| CAZyme | k141_12465 | k141_12465_3 | 2198 | 4435 | - | GH50 |
Gene ID: k141_12465_1
Type: TC
Location: 2 - 820 (-)
Type: TC
Location: 2 - 820 (-)
Gene ID: k141_12465_2
Type: peptidase
Location: 919 - 2064 (-)
Type: peptidase
Location: 919 - 2064 (-)
Gene ID: k141_12465_3
Type: CAZyme
Location: 2198 - 4435 (-)
Type: CAZyme
Location: 2198 - 4435 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.