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Cluster: CGMR096096_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_86458 k141_86458_18 20389 22953 + GT2
TC k141_86458 k141_86458_19 23231 24031 + 3.A.1.3.17
TC k141_86458 k141_86458_20 24111 25073 + 3.A.1.3.17
TC k141_86458 k141_86458_21 25066 25800 + 3.A.1.3.4
TC k141_86458 k141_86458_22 25842 27785 - 1.B.52.2.1
TC k141_86458 k141_86458_23 27937 29853 - 1.B.52.2.1
pfam k141_86458 k141_86458_24 29954 30661 - Methyltrans_RNA
TC k141_86458 k141_86458_25 30658 31449 - 2.A.64.1.1
pfam k141_86458 k141_86458_26 31446 31862 - TatA_B_E
TC k141_86458 k141_86458_27 31866 32150 - 2.A.64.1.1
Gene ID: k141_86458_18
Type: CAZyme
Location: 20389 - 22953 (+)
Gene ID: k141_86458_19
Type: TC
Location: 23231 - 24031 (+)
Gene ID: k141_86458_20
Type: TC
Location: 24111 - 25073 (+)
Gene ID: k141_86458_21
Type: TC
Location: 25066 - 25800 (+)
Gene ID: k141_86458_22
Type: TC
Location: 25842 - 27785 (-)
Gene ID: k141_86458_23
Type: TC
Location: 27937 - 29853 (-)
Gene ID: k141_86458_24
Type: pfam
Location: 29954 - 30661 (-)
Gene ID: k141_86458_25
Type: TC
Location: 30658 - 31449 (-)
Gene ID: k141_86458_26
Type: pfam
Location: 31446 - 31862 (-)
Gene ID: k141_86458_27
Type: TC
Location: 31866 - 32150 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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