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Cluster: CGMR096096_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78933 k141_78933_1 171 2492 + 1.B.14.1.10
peptidase k141_78933 k141_78933_2 2504 3337 + S09.UNW
CAZyme k141_78933 k141_78933_3 3837 5396 + GT5
CAZyme k141_78933 k141_78933_4 5411 7153 + GH13_10
CAZyme k141_78933 k141_78933_5 7150 9219 + GH77
CAZyme k141_78933 k141_78933_6 9216 11984 + GH13_26
pfam k141_78933 k141_78933_7 12002 12319 + DUF2934
CAZyme k141_78933 k141_78933_8 12471 14624 + GH13_11
pfam k141_78933 k141_78933_9 15031 16107 + Autotransporter
CAZyme k141_78933 k141_78933_10 16156 18369 - CBM48 | GH13_9
CAZyme k141_78933 k141_78933_11 18370 21681 - GH13_16
CAZyme k141_78933 k141_78933_12 21707 23725 - GH13_3
Gene ID: k141_78933_1
Type: TC
Location: 171 - 2492 (+)
Gene ID: k141_78933_2
Type: peptidase
Location: 2504 - 3337 (+)
Gene ID: k141_78933_3
Type: CAZyme
Location: 3837 - 5396 (+)
Gene ID: k141_78933_4
Type: CAZyme
Location: 5411 - 7153 (+)
Gene ID: k141_78933_5
Type: CAZyme
Location: 7150 - 9219 (+)
Gene ID: k141_78933_6
Type: CAZyme
Location: 9216 - 11984 (+)
Gene ID: k141_78933_7
Type: pfam
Location: 12002 - 12319 (+)
Gene ID: k141_78933_8
Type: CAZyme
Location: 12471 - 14624 (+)
Gene ID: k141_78933_9
Type: pfam
Location: 15031 - 16107 (+)
Gene ID: k141_78933_10
Type: CAZyme
Location: 16156 - 18369 (-)
Gene ID: k141_78933_11
Type: CAZyme
Location: 18370 - 21681 (-)
Gene ID: k141_78933_12
Type: CAZyme
Location: 21707 - 23725 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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