Cluster: CGMR096096_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- CGC Family ID: CGCFAM_09163
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_179579 | k141_179579_27 | 30572 | 31909 | - | 2.A.66.1.4 |
| peptidase | k141_179579 | k141_179579_28 | 32088 | 36989 | + | I39.008 |
| NULL(UNKNOWN) | k141_179579 | k141_179579_29 | 37144 | 37437 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_179579 | k141_179579_30 | 37497 | 39857 | + | GT51 |
Gene ID: k141_179579_27
Type: TC
Location: 30572 - 31909 (-)
Type: TC
Location: 30572 - 31909 (-)
Gene ID: k141_179579_28
Type: peptidase
Location: 32088 - 36989 (+)
Type: peptidase
Location: 32088 - 36989 (+)
Gene ID: k141_179579_29
Type:
Location: 37144 - 37437 (-)
Type:
Location: 37144 - 37437 (-)
Gene ID: k141_179579_30
Type: CAZyme
Location: 37497 - 39857 (+)
Type: CAZyme
Location: 37497 - 39857 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.