Cluster: CGMR096096_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- CGC Family ID: CGCFAM_02108
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_92216 | k141_92216_9 | 8380 | 9108 | + | 2.A.121.1.1 |
| TC | k141_92216 | k141_92216_10 | 9146 | 10462 | - | 1.B.52.2.2 |
| CAZyme | k141_92216 | k141_92216_11 | 10639 | 11871 | + | GT4 |
Gene ID: k141_92216_9
Type: TC
Location: 8380 - 9108 (+)
Type: TC
Location: 8380 - 9108 (+)
Gene ID: k141_92216_10
Type: TC
Location: 9146 - 10462 (-)
Type: TC
Location: 9146 - 10462 (-)
Gene ID: k141_92216_11
Type: CAZyme
Location: 10639 - 11871 (+)
Type: CAZyme
Location: 10639 - 11871 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.