Genome Details
Selected Rep_genome_ID: C89.bin_3
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF015_bin.3 | 4,975,660 | 99.26% | 0% | NA | Africa | H3AfricaPhase2 |
| C89.bin_3 | 5,237,189 | 99.26% | 0.01% | China(Inner Mongolia) | Asia | IMGG |
| CGMR033689 | 4,954,241 | 98.51% | 0% | China | Asia | CGMR |
| GCA_021633405.1_ASM2163340v1_genomic | 4,836,769 | 99.26% | 0% | NA | Africa | H3AfricaPhase1 |
| Rep_484 | 5,107,978 | 98.6369% | 0.185874% | NA | NA | WIS |
| SPMP13_bin.91 | 4,953,357 | 97.92% | 0.56% | Singapore | Asia | SPMP |
| SPMP87_bin.56 | 4,552,837 | 94.41% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C89.bin_3_CGC20 | CGCFAM_00667 | Yes | 16 | 3 | |
| C89.bin_3_CGC36 | CGCFAM_00670 | Yes | 5 | 1 | |
| C89.bin_3_CGC11 | CGCFAM_00937 | Yes | 9 | 2 | |
| C89.bin_3_CGC55 | CGCFAM_01107 | Yes | 18 | 3 | |
| C89.bin_3_CGC39 | CGCFAM_01543 | Yes | 8 | 1 | |
| C89.bin_3_CGC44 | CGCFAM_01728 | Yes | 4 | 1 | |
| C89.bin_3_CGC37 | CGCFAM_02320 | Yes | 4 | 1 | |
| C89.bin_3_CGC43 | CGCFAM_02366 | Yes | 6 | 1 | |
| C89.bin_3_CGC33 | CGCFAM_02990 | Yes | 3 | 1 | |
| C89.bin_3_CGC50 | CGCFAM_03045 | Yes | 12 | 9 | |
| C89.bin_3_CGC71 | CGCFAM_04150 | Yes | 12 | 3 | beta-mannan |
| C89.bin_3_CGC2 | CGCFAM_05283 | Yes | 3 | 1 | |
| C89.bin_3_CGC6 | CGCFAM_06646 | Yes | 9 | 1 | |
| C89.bin_3_CGC4 | CGCFAM_06647 | Yes | 12 | 5 | |
| C89.bin_3_CGC52 | CGCFAM_06648 | Yes | 5 | 3 | |
| C89.bin_3_CGC72 | CGCFAM_06656 | Yes | 28 | 7 | |
| C89.bin_3_CGC38 | CGCFAM_06658 | Yes | 9 | 2 | |
| C89.bin_3_CGC35 | CGCFAM_06659 | Yes | 11 | 3 | |
| C89.bin_3_CGC23 | CGCFAM_06660 | Yes | 5 | 2 | |
| C89.bin_3_CGC84 | CGCFAM_07716 | Yes | 3 | 1 | |
| C89.bin_3_CGC82 | CGCFAM_08048 | Yes | 7 | 1 |
Top CAZyme Families