dbCAN Logo

Cluster: C89.bin_3_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C89_contig_31 C89_contig_31_434 553522 554796 - GH171
TC C89_contig_31 C89_contig_31_435 554838 556136 - 2.A.1.25.5
pfam C89_contig_31 C89_contig_31_436 556152 557507 - SpoIID
pfam C89_contig_31 C89_contig_31_437 557504 558436 - DUF4922
CAZyme C89_contig_31 C89_contig_31_438 558433 559899 - GT2
pfam C89_contig_31 C89_contig_31_439 559923 561788 - Metallophos | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
NULL(UNKNOWN) C89_contig_31 C89_contig_31_440 561884 564955 - NULL(UNKNOWN)
[View Structural Homologs]
TC C89_contig_31 C89_contig_31_441 564958 566415 - 2.A.21.3.7
CAZyme C89_contig_31 C89_contig_31_442 566456 567661 - GH171
pfam C89_contig_31 C89_contig_31_443 567846 569543 - SusD_RagB | SusD-like_3
TC C89_contig_31 C89_contig_31_444 569573 572908 - 1.B.14.6.1
NULL(UNKNOWN) C89_contig_31 C89_contig_31_445 573370 574218 - NULL(UNKNOWN)
[View Structural Homologs]
pfam C89_contig_31 C89_contig_31_446 574518 575528 - Semialdhyde_dh | Semialdhyde_dhC
TC C89_contig_31 C89_contig_31_447 575726 577861 + 2.A.37.2.5
pfam C89_contig_31 C89_contig_31_448 577843 578571 + ThiF
TC C89_contig_31 C89_contig_31_449 578576 579226 + 3.A.1.122.2
pfam C89_contig_31 C89_contig_31_450 579227 580129 - HHH_3 | HHH_3 | HHH_3
TC C89_contig_31 C89_contig_31_451 580132 581499 - 2.A.22.5.3
Gene ID: C89_contig_31_434
Type: CAZyme
Location: 553522 - 554796 (-)
Gene ID: C89_contig_31_435
Type: TC
Location: 554838 - 556136 (-)
Gene ID: C89_contig_31_436
Type: pfam
Location: 556152 - 557507 (-)
Gene ID: C89_contig_31_437
Type: pfam
Location: 557504 - 558436 (-)
Gene ID: C89_contig_31_438
Type: CAZyme
Location: 558433 - 559899 (-)
Gene ID: C89_contig_31_439
Type: pfam
Location: 559923 - 561788 (-)
Gene ID: C89_contig_31_440
Type:
Location: 561884 - 564955 (-)
Gene ID: C89_contig_31_441
Type: TC
Location: 564958 - 566415 (-)
Gene ID: C89_contig_31_442
Type: CAZyme
Location: 566456 - 567661 (-)
Gene ID: C89_contig_31_443
Type: pfam
Location: 567846 - 569543 (-)
Gene ID: C89_contig_31_444
Type: TC
Location: 569573 - 572908 (-)
Gene ID: C89_contig_31_445
Type:
Location: 573370 - 574218 (-)
Gene ID: C89_contig_31_446
Type: pfam
Location: 574518 - 575528 (-)
Gene ID: C89_contig_31_447
Type: TC
Location: 575726 - 577861 (+)
Gene ID: C89_contig_31_448
Type: pfam
Location: 577843 - 578571 (+)
Gene ID: C89_contig_31_449
Type: TC
Location: 578576 - 579226 (+)
Gene ID: C89_contig_31_450
Type: pfam
Location: 579227 - 580129 (-)
Gene ID: C89_contig_31_451
Type: TC
Location: 580132 - 581499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C89_contig_31_438 vegan > omnivore 1.22032 0.00500

🧭 Explore Read Mapping of CGC

← Back to Cluster List