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Genome Details

Selected Rep_genome_ID: C89.bin_3
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides fragilis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
BF015_bin.3 4,975,660 99.26% 0% NA Africa H3AfricaPhase2
C89.bin_3 5,237,189 99.26% 0.01% China(Inner Mongolia) Asia IMGG
CGMR033689 4,954,241 98.51% 0% China Asia CGMR
GCA_021633405.1_ASM2163340v1_genomic 4,836,769 99.26% 0% NA Africa H3AfricaPhase1
Rep_484 5,107,978 98.6369% 0.185874% NA NA WIS
SPMP13_bin.91 4,953,357 97.92% 0.56% Singapore Asia SPMP
SPMP87_bin.56 4,552,837 94.41% 0% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
C89.bin_3_CGC1 CGCFAM_00001 Yes 10 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
C89.bin_3_CGC18 CGCFAM_00001 Yes 8 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
C89.bin_3_CGC19 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
C89.bin_3_CGC47 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
C89.bin_3_CGC83 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
C89.bin_3_CGC29 CGCFAM_00003 Yes 8 4
C89.bin_3_CGC80 CGCFAM_00003 Yes 7 3
C89.bin_3_CGC8 CGCFAM_00003 Yes 7 2
C89.bin_3_CGC21 CGCFAM_00007 Yes 9 5
C89.bin_3_CGC75 CGCFAM_00018 Yes 5 1
C89.bin_3_CGC25 CGCFAM_00033 Yes 10 7
C89.bin_3_CGC46 CGCFAM_00065 Yes 5 4
C89.bin_3_CGC7 CGCFAM_00068 Yes 7 5
C89.bin_3_CGC67 CGCFAM_00076 Yes 6 2
C89.bin_3_CGC30 CGCFAM_00152 Yes 10 3
C89.bin_3_CGC73 CGCFAM_00170 Yes 7 4
C89.bin_3_CGC31 CGCFAM_00194 Yes 18 8 host glycan
PUL0348_C89.bin_3_C1 CGCFAM_00194 Yes 12 8 host glycan
C89.bin_3_CGC64 CGCFAM_00375 Yes 8 4
C89.bin_3_CGC9 CGCFAM_00388 Yes 3 1
C89.bin_3_CGC3 CGCFAM_00440 Yes 11 4
C89.bin_3_CGC10 CGCFAM_00445 Yes 5 1
C89.bin_3_CGC59 CGCFAM_00485 Yes 12 1 galactan/pectin/host glycan
C89.bin_3_CGC41 CGCFAM_00581 Yes 6 2
C89.bin_3_CGC32 CGCFAM_00665 Yes 3 1
Top CAZyme Families